STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3632DUF24, predicted transcriptional regulator, related to MarR family. (160 aa)    
Predicted Functional Partners:
RPA2689
Possible thiol-specific antioxidant related protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
    0.725
RPA3222
DUF24, predicted transcriptional regulator, related to MarR family.
  
    0.721
RPA3633
Conserved hypothetical protein.
       0.714
RPA2702
DUF24, predicted transcriptional regulator, related to MarR family.
  
    0.685
RPA0326
DUF24, predicted transcriptional regulator, related to MarR family.
  
     0.666
RPA3631
Putative glucose dehydrogenase.
  
    0.547
RPA0941
Conserved hypothetical protein; COGs COG2337.
   
    0.526
RPA2123
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.456
tal
Putative Transaldolase Phosphoglucose isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
    0.452
RPA1282
Possible transcriptional regulator, ArsR family.
 
  
 0.408
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.