Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA3632DUF24, predicted transcriptional regulator, related to MarR family. (160 aa)    
Predicted Functional Partners:
RPA2689
Possible thiol-specific antioxidant related protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    
 0.727
RPA3222
DUF24, predicted transcriptional regulator, related to MarR family.
  
     0.720
RPA3633
Conserved hypothetical protein.
       0.714
RPA2702
DUF24, predicted transcriptional regulator, related to MarR family.
  
     0.685
RPA0326
DUF24, predicted transcriptional regulator, related to MarR family.
  
     0.666
RPA3631
Putative glucose dehydrogenase.
       0.546
RPA0941
Conserved hypothetical protein; COGs COG2337.
   
    0.520
tal
Putative Transaldolase Phosphoglucose isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
       0.448
cobB-2
Sir2 family, possible ADP ribosyltransferase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
    0.419
RPA1282
Possible transcriptional regulator, ArsR family.
 
  
 0.402
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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