Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ureAUrease gamma subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the urease gamma subunit family. (100 aa)    
Predicted Functional Partners:
ureC
Urease alpha subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 0.999
ureB
Urease beta subunit; Belongs to the urease beta subunit family.
 0.999
ureD
Possible urease accessory protein D; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.996
ureF
Possible urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.974
RPA1405
Putative urea amidolyase.
    
 0.936
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 0.920
rocF
Putative arginase; Belongs to the arginase family.
    
  0.911
allA
Putative ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.
  
 
  0.904
RPA1404
glutamyl-tRNA(Gln) amidotransferase subunit A.
     
  0.900
RPA1466
Putative glutamyl-tRNA(Gln) amidotransferase subunit A.
     
  0.900
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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