cspA5 protein (Rhodopseudomonas palustris CGA009)

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cspA5

Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (84 aa)

Predicted Functional Partners:

mucR

0.714

vanA

0.637

infA

0.604

RPA3670

0.582

rpsL

0.549

rpmE

0.522

rpmJ,

0.517

rpsU,-2

0.485

rplO

0.469

rpsE

0.454

Your Current Organism:

Rhodopseudomonas palustris CGA009

NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPA3670	cspA5	RPA3670	RPA3672	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.582
RPA3670	infA	RPA3670	RPA3671	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	0.903
RPA3670	rplO	RPA3670	RPA3231	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	50S ribosomal protein L15; Binds to the 23S rRNA.	0.726
RPA3670	rpsE	RPA3670	RPA3233	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.763
RPA3670	rpsL	RPA3670	RPA3255	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.497
cspA5	RPA3670	RPA3672	RPA3670	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.582
cspA5	infA	RPA3672	RPA3671	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	0.604
cspA5	mucR	RPA3672	RPA1852	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Putative transcriptional regulator MucR; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.714
cspA5	rplO	RPA3672	RPA3231	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	50S ribosomal protein L15; Binds to the 23S rRNA.	0.469
cspA5	rpmE	RPA3672	RPA0918	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Possible 50S ribosomal protein L31; Binds the 23S rRNA.	0.522
cspA5	rpmJ,	RPA3672	RPA4197	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	50S ribosomal protein L36; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.517
cspA5	rpsE	RPA3672	RPA3233	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.454
cspA5	rpsL	RPA3672	RPA3255	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.549
cspA5	rpsU,-2	RPA3672	RPA4176	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Ribosomal protein S21; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.485
cspA5	vanA	RPA3672	RPA3619	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	Putative vanillate O-demethylase oxygenase, iron-sulfur subunit.	0.637
infA	RPA3670	RPA3671	RPA3670	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.	0.903
infA	cspA5	RPA3671	RPA3672	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	Cold shock DNA binding protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.604
infA	rplO	RPA3671	RPA3231	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	50S ribosomal protein L15; Binds to the 23S rRNA.	0.979
infA	rpmE	RPA3671	RPA0918	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	Possible 50S ribosomal protein L31; Binds the 23S rRNA.	0.632
infA	rpmJ,	RPA3671	RPA4197	Translation initiation factor if-1 (infA); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.	50S ribosomal protein L36; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.920

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