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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emrAPutative multidrug resistance protein. (392 aa)    
Predicted Functional Partners:
emrB2
Putative drug efflux pump, Major Facilitator Superfamily (MFS).
 
 0.969
FarB
Putative efflux pump protein FarB; Belongs to the major facilitator superfamily.
 
 0.863
rmrB
Putative multidrug efflux pump, Major Facilitator Superfamily (MFS); Citation: Gonzalez-Pasayo and Martinez-Romero (2000) Mol. Plant Microbe Interact. 13:572-577; Belongs to the major facilitator superfamily.
 
 0.860
emrB1
Putative multidrug resistance protein B (drug efflux transporter); Belongs to the major facilitator superfamily.
 
 0.853
matE2
Putative multidrug efflux protein (NorM); Multidrug efflux pump; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family.
   
  
 0.738
RPA3699
Possible iron-chelator utilization protein.
  
    0.730
mepA
Putative penicillin-insensitive murein endopeptidase A.
   
  
 0.722
mexA
Putative RND multidrug efflux membrane fusion protein MexA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.713
mexB
RND multidrug efflux transporter MexB.
 
  
 0.697
oprN
Putative outer membrane efflux protein OprN precursor.
 
 
 0.693
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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