Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA3728Conserved unknown protein. (670 aa)    
Predicted Functional Partners:
RPA0207
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.597
RPA1807
Possible heavy metal efflux pump, HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.566
RPA0563
Conserved hypothetical protein.
  
   
 0.556
PA0781
Putative outer membrane hemin/siderophore receptor protein.
  
   
 0.549
ragD
Possible cation/heavy metal efflux pump, HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
 0.532
RPA3727
CorA Metal Ion (Mg2+/Co2+) transporter (MIT) family protein.
  
    0.474
ragC
Putative cation efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
   
 0.462
RPA2289
Hypothetical protein; InterPro IPR001440.
  
     0.405
RPA3779
Conserved hypothetical protein; InterPro IPR000104:IPR005490 COGs COG1376.
  
     0.402
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.