Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
RPA3840Putative hydroxamate-type ferrisiderophore receptor. (769 aa)    
Predicted Functional Partners:
RPA3842
Uncharacterized iron-regulated membrane protein DUF337.
 
   
 0.776
RPA3281
Probable FecR, iron siderophore sensor protein.
 
  
 0.736
RPA1335
Probable FecR, iron siderophore sensor protein.
 
  
 0.733
RPA1340
Probable FecR, iron siderophore sensor protein.
 
  
 0.728
fecR4
Probable FecR, iron siderophore sensor protein.
 
  
 0.728
fecR3
Probable FecR, iron siderophore sensor protein.
 
  
 0.717
RPA3841
Hypothetical protein.
       0.709
RPA1345
Conserved hypothetical protein.
 
 
 0.679
RPA1338
Conserved hypothetical protein.
 
 
 0.660
RPA1059
Probable outer membrane protein, TonB-dependent receptor.
  
   
 0.658
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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