Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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RPA3961Putative periplasmic binding protein for ABC transporter; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (297 aa)    
Predicted Functional Partners:
RPA3963
Putative permease of ABC transporter.
 
 0.997
RPA3962
ATP-binding component of ABC transporter.
 
 0.996
RPA4238
Putative permease of ABC transporter.
 
 0.991
RPA4237
ATP-binding component of ABC transporter.
 
 0.990
RPA4236
Mce4/Rv3499c/MTV023.06c protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
0.971
atpG
Putative H+-transporting ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
      
 0.638
RPA2303
Putative 3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.638
RPA4760
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
      
 0.638
RPA0048
Conserved hypothetical protein; COGs COG1934.
  
  
 0.613
RPA3964
Putative muconate cycloisomerase.
       0.600
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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