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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
RPA3964Putative muconate cycloisomerase. (331 aa)    
Predicted Functional Partners:
RPA2149
Putative hydroxyquinol 1,2-dioxygenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.869
RPA1607
Appr-1''-p processing enzyme family protein homolog; CTG start codon; 64% identity to Bradyrhizobium japonicum Bll5710 protein.
   
   0.761
RPA3962
ATP-binding component of ABC transporter.
       0.613
RPA3963
Putative permease of ABC transporter.
       0.613
RPA3961
Putative periplasmic binding protein for ABC transporter; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
       0.600
RPA3686
NLP/P60.
 
  
 0.580
vanB
Putative vanillate O-demethylase oxidoreductase.
  
  
 0.472
RPA3764
Putative 2Fe:2S ferredoxin; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.472
RPA0284
Conserved hypothetical protein.
 
     0.443
badI
2-ketocyclohexanecarboxyl-CoA hydrolase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
     
 0.436
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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