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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA3976Putative nodulation protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (601 aa)    
Predicted Functional Partners:
RPA3986
Putative ADP-heptose--LPS heptosyltransferase II.
 
  
 0.555
mcyE
Possible McyE polykeitde synthase and peptide synthetase (AF183408).
 
   
 0.524
RPA3338
Possible Condensation domain, peptide synthetase.
 
  
 0.439
RPA3989
Putative lipopolysaccharide-heptosyl-transferase.
 
  
 0.436
RPA3927
Possible phosphoheptose isomerase.
 
    0.403
lpcA
Possible phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
    0.403
RPA4337
Putative phosphoglycolate phosphatase.
  
    0.401
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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