Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4077ATPase, ParA type; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (224 aa)    
Predicted Functional Partners:
parB1
Chromosome partitioning protein, ParB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the ParB family.
 
 
 0.726
RPA2251
Putative plasmid stabilization protein.
 
 
 0.695
parB2
Possible ParB-like partioning protein; Belongs to the ParB family.
  
 
 0.647
RPA2209
ParB-like nuclease.
  
 
 0.635
RPA2655
Beta-(1-3)-glucosyl transferase; Citation: Bhagwat and Keister (1995) Mol. Plant Microbe Interact. 8:366-370.
 
 
 0.557
RPA4721
possible+E2677 pyruvate-flavodoxin oxidoreductase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
  
 0.544
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.512
RPA4687
Possible Glycosyl transferases.
  
 
 0.502
RPA4078
Conserved hypothetical protein.
       0.498
gidB
Putative glucose inhibited division protein B (GidB); Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.462
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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