STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA4119Hypothetical protein, possible TrbK. (128 aa)    
Predicted Functional Partners:
trbG2
Conjugal transfer protein trbG.
  
    0.802
RPA4122
Conjugal transfer protein TrbD.
  
    0.792
trbC2
Conjugal transfer protein trbC.
  
    0.792
trbI2
Putative conjugal transfer protein trbI.
       0.791
trbF2
Conjugal transfer protein trbF.
       0.791
RPA4118
Conjugal transfer protein trbL.
  
    0.791
RPA4120
Possible conjugal transfer protein trbJ.
       0.791
trbE2
Conjugal transfer protein trbE.
       0.791
trbB2
Conjugal transfer protein trbB.
       0.784
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.