Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4237ATP-binding component of ABC transporter. (259 aa)    
Predicted Functional Partners:
RPA4236
Mce4/Rv3499c/MTV023.06c protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.999
RPA4238
Putative permease of ABC transporter.
 
 0.999
RPA3963
Putative permease of ABC transporter.
 
 0.996
RPA3961
Putative periplasmic binding protein for ABC transporter; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.990
RPA3962
ATP-binding component of ABC transporter.
  
  
 
0.902
RPA2329
Putative ABC transporter permease protein.
 
      0.880
RPA1215
Putative ABC transporter, permease protein.
 
      0.837
RPA0144
Sulfate transporter/antisigma-factor antagonist domain.
  
 
 0.822
RPA1471
Putative dipeptide ABC transporter (permease).
 
      0.820
RPA2644
Putative ABC transporter permease protein.
 
      0.802
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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