Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4249Response regulator receiver (CheY-like protein); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (130 aa)    
Predicted Functional Partners:
fixL
Two component low oxygen sensor histidine kinase with PAS domains, fixL; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.901
fixK2
Nitrogen fixation transcriptional regulator fixK2, Crp/Fnr family.
     
 0.834
RPA2292
Sensor histidine kinase.
 
 
 0.786
RPA1672
Conserved hypothetical protein; InterPro IPR007055.
  
  
 0.785
RPA1313
Sensor histidine kinase with multiple PAS/PAC domains.
 
 
 0.768
RPA4239
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
  
 0.756
RPA1673
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
  
 0.747
fixJ
Two-component nitrogen fixation transcriptional regulator fixJ, LuxR family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
    
0.743
RPA4235
Putative cytochrome c, class I.
      
 0.741
RPA4238
Putative permease of ABC transporter.
      
 0.741
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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