Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4282Possible activator of photopigment and puc with BLUF domain. (157 aa)    
Predicted Functional Partners:
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
  
 
 0.650
RPA1681
Sensor histidine kinase with a response regulator receiver domain.
  
  
 0.566
RPA4281
Conserved hypothetical protein.
  
    0.520
coxE
Heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
    0.508
RPA3170
Putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS and GAF domains.
  
 
 0.475
RPA3206
Conserved hypothetical protein; InterPro IPR000104.
   
  
 0.413
RPA2009
Possible chemotaxis protein motA.
  
    0.411
RPA0981
Sensor histidine kinase with multiple PAS and a response regulator receiver domain.
  
 
 0.401
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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