Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPA4412Conserved unknown protein; COGs COG1853. (205 aa)    
Predicted Functional Partners:
RPA4413
Possible transcriptional regulator, TetR family.
     
 0.841
RPA4414
Putative RND efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.814
RPA4415
Putative component of multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.772
ribB
Possible GTP cyclohydrolase II, riboflavin biosynthesis; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
  
 0.577
glpR
Glycerol-3-phosphate regulon repressor glpR, DeoR family.
       0.555
RPA4416
Conserved hypothetical protein.
       0.436
RPA4417
Sensor histidine kinase with PAS/PAC and response regulator receiver domains.
     
 0.414
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.