STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA4472Putative c-type cytochrome biogenesis protein. (247 aa)    
Predicted Functional Partners:
RPA4471
Conserved hypothetical protein; InterPro IPR006311:IPR006663 COGs COG2143.
  
  
 0.768
RPA4744
Possible thioredoxin-like protein.
 
  
 0.743
RPA4473
Conserved hypothetical protein; InterPro IPR006663.
 
  
 0.688
cycZ,
Heme exporter protein C (ABC transporter permease component); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.635
cycY,
Putative cytochrome c biogenesis protein, thiol:disulfide interchange protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.603
RPA4474
Transcriptional regulator, ArsR family.
  
  
 0.561
rlgA
DNA invertase gene rlgA.
  
    0.484
mcyE
Possible McyE polykeitde synthase and peptide synthetase (AF183408).
  
  
 0.447
RPA4475
Conserved hypothetical protein; COGs COG2391.
  
  
 0.444
RPA2207
Putative recombinase.
   
    0.416
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.