STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
czcA3Putative heavy metal cation efflux system protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1031 aa)    
Predicted Functional Partners:
czcB
Possible RND divalent metal cation efflux membrane fusion protein CzcB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.963
RPA1421
Possible efflux protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.864
RPA4478
Conserved hypothetical protein.
       0.855
RPA2055
Possible RND divalent metal cation efflux membrane fusion protein CzcB precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.835
RPA1807
Possible heavy metal efflux pump, HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.821
RPA2054
Possible outer membrane protein precursor CzcC.
 
  
 0.751
ragD
Possible cation/heavy metal efflux pump, HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.534
RPA4415
Putative component of multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.481
RPA1960
Putative RND efflux membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.474
RPA4679
Possible component of multidrug efflux system.
 
 
 0.474
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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