Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4487DSBA oxidoreductase:Tat pathway signal; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (224 aa)    
Predicted Functional Partners:
RPA4486
Conserved hypothetical protein.
 
     0.807
RPA1022
Possible outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.782
RPA2442
Putative outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.736
RPA0541
Conserved hypothetical protein.
 
 
 0.704
mutY
Adenine glycosylase mutY; Adenine glycosylase active on G-A mispairs.
     
 0.635
RPA4744
Possible thioredoxin-like protein.
 
 
 0.567
ftsW
Putative cell division protein ftsW; Belongs to the SEDS family.
 
  
 0.546
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.493
recO
Putative DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
  
 0.484
RPA0912
Unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
  
 0.433
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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