RPA4490 protein (Rhodopseudomonas palustris CGA009)

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Score

RPA4490

Conserved hypothetical protein. (326 aa)

Predicted Functional Partners:

rpsP,

0.807

rpsO

0.802

RPS6

0.777

rpsE

0.768

rpsJ

0.768

rpsB

0.765

rpsQ

0.763

rpsG

0.756

rpsI,

0.753

rpsK

0.715

Your Current Organism:

Rhodopseudomonas palustris CGA009

NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPA4490	RPS6	RPA4490	RPA3077	Conserved hypothetical protein.	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	0.777
RPA4490	rpsB	RPA4490	RPA2922	Conserved hypothetical protein.	30S ribosomal protein S2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the universal ribosomal protein uS2 family.	0.765
RPA4490	rpsE	RPA4490	RPA3233	Conserved hypothetical protein.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.768
RPA4490	rpsG	RPA4490	RPA3254	Conserved hypothetical protein.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.	0.756
RPA4490	rpsI,	RPA4490	RPA2768	Conserved hypothetical protein.	Ribosomal protein S9; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.753
RPA4490	rpsJ	RPA4490	RPA3251	Conserved hypothetical protein.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes.	0.768
RPA4490	rpsK	RPA4490	RPA3227	Conserved hypothetical protein.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.715
RPA4490	rpsO	RPA4490	RPA0433	Conserved hypothetical protein.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family.	0.802
RPA4490	rpsP,	RPA4490	RPA0244	Conserved hypothetical protein.	Ribosomal protein S16; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.807
RPA4490	rpsQ	RPA4490	RPA3241	Conserved hypothetical protein.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.763
RPS6	RPA4490	RPA3077	RPA4490	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Conserved hypothetical protein.	0.777
RPS6	rpsB	RPA3077	RPA2922	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S2; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the universal ribosomal protein uS2 family.	0.998
RPS6	rpsE	RPA3077	RPA3233	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.	0.995
RPS6	rpsG	RPA3077	RPA3254	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.	0.994
RPS6	rpsI,	RPA3077	RPA2768	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein S9; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.997
RPS6	rpsJ	RPA3077	RPA3251	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes.	0.994
RPS6	rpsK	RPA3077	RPA3227	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.994
RPS6	rpsO	RPA3077	RPA0433	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. Belongs to the universal ribosomal protein uS15 family.	0.996
RPS6	rpsP,	RPA3077	RPA0244	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	Ribosomal protein S16; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.	0.994
RPS6	rpsQ	RPA3077	RPA3241	Possible 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. Belongs to the bacterial ribosomal protein bS6 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.995