STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA4491Conserved hypothetical protein; InterPro IPR001343 COGs COG3210. (971 aa)    
Predicted Functional Partners:
RPA3431
Hypothetical protein.
  
     0.763
RPA1865
Conserved hypothetical protein.
  
    0.701
RPA4768
Conserved hypothetical protein.
 
 
 0.671
RPA3171
Conserved hypothetical protein; COGs COG1942; Belongs to the 4-oxalocrotonate tautomerase family.
  
     0.658
RPA2457
Hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.619
RPA0249
Hypothetical protein; InterPro IPR000104:IPR000694.
  
     0.593
RPA1622
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.584
aro
Chorismate mutase.
  
 
   0.570
RPA4731
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.562
RPA1995
Conserved hypothetical protein.
  
     0.553
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.