Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4512Possible response regulator receiver. (103 aa)    
Predicted Functional Partners:
RPA4513
Putative signal transduction histidine kinase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
   
 0.900
RPA2076
Putative signal transduction histidine kinase.
 
   
 0.748
RPA0007
Putative signal transduction histidine kinase with PAS/PAC domains.
 
   
 0.717
RPA4226
Putative signal transduction histidine kinase with Chase domain.
 
   
 0.679
RPA4223
Response regulator receiver (CheY-like protein) with unknown domain; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
   
 0.670
RPA1244
Conserved unknown protein.
  
     0.655
RPA1246
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.637
RPA2787
Putative signal transduction histidine kinase with PAS/PAC domain.
 
   
 0.634
RPA2075
Putative signal transduction histidine kinase with GAF and PAS/PAC domains.
 
   
 0.601
RPA1245
Conserved hypothetical protein.
  
     0.572
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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