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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA4530Conserved hypothetical protein; Belongs to the UPF0262 family. (163 aa)    
Predicted Functional Partners:
arsC4
Putative arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     0.976
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
  
    0.884
RPA3822
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.706
RPA3126
Conserved hypothetical protein.
 
   
 0.642
RPA4532
Conserved hypothetical protein.
 
     0.632
RPA0437
DUF448.
  
    0.631
RPA0200
Conserved hypothetical protein.
  
    0.624
RPA0837
Conserved hypothetical protein in cyt c oxidase gene clusters.
 
   
 0.609
RPA2421
NADH:ubiquinone oxidoreductase 17.2 k.
  
  
 0.592
RPA0939
Possible thiamine-phosphate pyrophosphorylase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.572
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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