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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA4580Uncharacterized protein family UPF0065:Tat pathway signal; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (335 aa)    
Predicted Functional Partners:
RPA2320
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
  
 0.891
RPA3495
Possible TctA subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
  
 0.888
RPA2321
Possible TctB subunit of the Tripartite Tricarboxylate Transporter(TTT) Family.
 
  
 0.880
RPA3496
Possible TctB subunit of the Tripartite Tricarboxylate Transport(TTT) Family.
 
  
 0.818
RPA4579
Possible serine protease, htrA-like.
  
    0.644
RPA4581
Conserved hypothetical protein.
       0.458
galE2
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
    0.410
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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