Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4583Possible UDP-N-acetyl-D-mannosamine transferase; Belongs to the glycosyltransferase 26 family. (305 aa)    
Predicted Functional Partners:
RPA3357
Putative glycosyltransferase.
   
 0.947
RPA2750
Probable glycosyl transferase.
   
 0.806
RPA4585
Lipopolysaccharide biosynthesis.
 
   
 0.590
RPA2752
Possible succinoglycan biosynthesis transport protein exoP.
 
  
 0.570
rmlD
Putative dTDP-6-deoxy-L-mannose-dehydrogenase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
  
 0.562
RPA3348
Possible polysaccharide export protein (AF040104).
 
  
 0.557
ispD
4-diphosphocytidyl-2C-methyl-D-erythritol synthase:YgbB; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.
     
 0.537
RPA3982
Glycosyl transferase, family 4.
 
 
 
 0.522
galE2
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.515
RPA3355
Putative exopolysaccharide polymerization protein.
     
 0.500
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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