STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fixAElectron trnasfer flavoprotein beta chain fixA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (281 aa)    
Predicted Functional Partners:
fixB
Electron transfer flavoprotein alpha chain protein fixB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.999
etfA
Electron transfer flavoprotein alpha-subunit, (ETFLS); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.999
fixX
Ferredoxin like protein, fixX; Could be a 3Fe-4S cluster-containing protein.
 
 0.997
RPA1037
Possible electron transfer flavoprotein dehydrogenases; Accepts electrons from ETF and reduces ubiquinone.
 
 0.992
fixC
Nitrogen fixation protein,fixC; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.
 
 
 0.987
nifS2
Nitrogenase cofactor synthesis protein nifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
  
  
 0.803
RPA0818
Probable 3-hydroxyacyl-CoA dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.782
pimF
enoyl-CoA hydratase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.780
RPA2305
acyl-CoA dehydrogenase.
 
 0.752
RPA2092
Conserved hypothetical protein; InterPro IPR001450.
  
 
 0.745
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.