Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
nifNNitrogenase reductase-associated ferredoxin, nifN; Belongs to the NifD/NifK/NifE/NifN family. (457 aa)    
Predicted Functional Partners:
nifE
Nitrogenase molybdenum-cofactor synthesis protein nifE; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.998
nifB
Nitrogen fixation protein nifB; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.991
nifD
Nitrogenase molybdenum-iron protein alpha chain, nifD; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 0.990
nifX
Nitrogenase molybdenum-iron protein nifX; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 
 0.987
nifH4
Nitrogenase iron protein, nifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.984
vnfE
Putative nitrogenase cofactor synthesis protein; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.977
vnfH
Nitrogenase iron protein, vnfH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.974
nifB1
Putative nitrogenase iron-molybdenum cofactor biosynthesis protein NifB.
  
 0.974
nifQ
Putative nitrogen fixation protein nifQ.
 
  
 0.963
anfH
Nitrogenase iron protein (nitrogenase component II) (nitrogenase reductase); The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.958
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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