Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cphA1Putative beta lactamase precursor. (317 aa)    
Predicted Functional Partners:
RPA4675
Possible 3-(3-hydroxy-phenyl)propionate hydroxylase.
  
 0.971
RPA4674
Conserved hypothetical protein.
 
     0.916
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
  
 0.906
maiA
Putative maleylacetoacetate isomerase.
 
 
 
 0.847
RPA2779
Possible hydrolase.
     
 0.759
RPA0798
Beta-lactamase-like.
     
 0.757
RPA2488
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     
 0.749
RPA3624
Possible gluconolactonase precursor; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
   
  
 0.749
RPA4424
Beta-lactamase-like; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     
 0.749
RPA1095
Beta-lactamase-like; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
      
 0.741
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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