Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
FldZPossible acyl transferase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (231 aa)    
Predicted Functional Partners:
ligJ
4-oxalomesaconate hydratase.
 
  
 0.996
FldX
Possible dehydrogenase.
     0.983
FldA
Conserved unknown protein; COGs COG2828.
 
  
 0.919
RPA2326
Acetolactate synthase I.
  
 
  0.902
ilvX
Putative acetolactate synthase large subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    
  0.900
RPA2001
Putative acetolactate synthase large subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    
  0.900
ilvI
Acetolactate synthase (large subunit); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
    
  0.900
ilvH
Acetolactate synthase (small subunit); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     
  0.900
ilvB
Putative acetolactate synthase large subunit; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the TPP enzyme family.
    
  0.900
RPA3917
Possible acetolactate synthase large subunit; Belongs to the TPP enzyme family.
    
  0.900
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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