Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
etfAElectron transfer flavoprotein alpha-subunit, (ETFLS); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (314 aa)    
Predicted Functional Partners:
fixA
Electron trnasfer flavoprotein beta chain fixA; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.999
etfB
Electron transfer flavoprotein beta chain, (ETFSS); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 0.999
RPA1037
Possible electron transfer flavoprotein dehydrogenases; Accepts electrons from ETF and reduces ubiquinone.
 
 0.992
RPA2305
acyl-CoA dehydrogenase.
 
 0.956
fixX
Ferredoxin like protein, fixX; Could be a 3Fe-4S cluster-containing protein.
  
 0.914
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
 
 
    0.911
fixC
Nitrogen fixation protein,fixC; Part of an electron transfer system. Belongs to the ETF-QO/FixC family.
 
 
 0.873
RPA2866
Pyruvate dehydrogenase E1 beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.871
RPA0958
Putative acyl-CoA dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
 
 0.834
hbdA
3-hydroxybutyryl-CoA dehydrogenase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
 
 0.831
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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