STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPA4767Lipolytic enzyme, G-D-S-L family; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished. (322 aa)    
Predicted Functional Partners:
opgC
Putative opgC protein.
 
    0.935
RPA4768
Conserved hypothetical protein.
 
    
0.913
RPA1105
Possible OpgC protein, require for succinylation of osmoregulated periplasmic glucans.
 
    0.606
RPA2536
Putative opgC protein.
 
    0.589
RPA4491
Conserved hypothetical protein; InterPro IPR001343 COGs COG3210.
 
 
 0.561
RPA1146
Conserved unknown protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.507
apaG
DUF525; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.493
RPA3431
Hypothetical protein.
  
    0.471
RPA3929
Conserved unknown protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.467
RPA2457
Hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
    0.427
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.