Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RPA4782Conserved hypothetical protein; COGs COG0392. (344 aa)    
Predicted Functional Partners:
phoR
Two component sensor histidine kinase phoR.
     
 0.877
RPA2457
Hypothetical protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
  
     0.686
RPA4783
Conserved hypothetical protein.
       0.634
RPA4784
OmpA/MotB domain; Observed by proteomics.
       0.621
aro
Chorismate mutase.
  
     0.616
pstS1
Periplasmic phosphate-binding protein, (PBP); Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
       0.565
RPA2020
3-oxoacyl-acyl carrier protein synthase; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
     0.490
RPA1865
Conserved hypothetical protein.
  
     0.485
lptD
Organic solvent tolerance protein homolog; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
    0.484
RPA0920
GCN5-related N-acetyltransferase.
 
     0.475
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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