Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
RPA4833Possible polysaccharide export protein. (213 aa)    
Predicted Functional Partners:
RPA2750
Probable glycosyl transferase.
 
  
 0.994
RPA2752
Possible succinoglycan biosynthesis transport protein exoP.
 
 
 0.993
RPA4585
Lipopolysaccharide biosynthesis.
 
 
 0.992
RPA3355
Putative exopolysaccharide polymerization protein.
 
 
 0.989
pssN
Putative capsule polysaccharide export outer membrane protein; Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished.
     
 0.912
RPA3357
Putative glycosyltransferase.
 
  
 0.837
RPA4581
Conserved hypothetical protein.
 
  
 0.777
manC,
Putative mannose-1-phosphate guanylyltransferase (GDP) (GDP-mannose pyrophosphorylase) (GMP); Observed by proteomics; Citation: Proteomics from VerBerkmoes et al. (2003) unpublished; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.763
RPA2751
Possible transferase.
 
  
 0.729
RPA0880
Hypothetical protein; InterPro IPR000694.
 
     0.698
Your Current Organism:
Rhodopseudomonas palustris CGA009
NCBI taxonomy Id: 258594
Other names: R. palustris CGA009, Rhodopseudomonas palustris str. CGA009, Rhodopseudomonas palustris strain CGA009
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