STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169305_00699Unannotated protein. (553 aa)    
Predicted Functional Partners:
GCA_900169305_00701
Unannotated protein.
 
    0.890
GCA_900169305_00700
Unannotated protein.
 
     0.888
GCA_900169305_01602
Unannotated protein.
  
 
 0.720
GCA_900169305_00462
Unannotated protein.
    
 0.639
GCA_900169305_01559
Unannotated protein.
  
     0.630
GCA_900169305_00756
Unannotated protein; Belongs to the glycosyl hydrolase 3 family.
     
 0.623
GCA_900169305_00357
Unannotated protein.
  
 0.606
GCA_900169305_00389
Unannotated protein.
  
 0.606
GCA_900169305_01942
Unannotated protein.
  
 0.606
GCA_900169305_02007
Unannotated protein.
  
 0.606
Your Current Organism:
Marinilactibacillus piezotolerans
NCBI taxonomy Id: 258723
Other names: DSM 16108, JCM 12337, M. piezotolerans, Marinilactibacillus piezotolerans Toffin et al. 2005, strain LT20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.