STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900169305_02167Unannotated protein. (202 aa)    
Predicted Functional Partners:
GCA_900169305_02168
Unannotated protein.
       0.773
ftsY
Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
  
     0.609
ffh
Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
   
 0.578
GCA_900169305_02166
Unannotated protein.
       0.561
GCA_900169305_00628
Unannotated protein.
  
  
  0.518
GCA_900169305_01858
Unannotated protein; Belongs to the ABC transporter superfamily.
  
  
  0.502
GCA_900169305_02165
Unannotated protein.
       0.498
GCA_900169305_00615
Unannotated protein.
  
  
  0.476
GCA_900169305_01304
Unannotated protein; Belongs to the MurCDEF family. MurE subfamily.
      
 0.446
GCA_900169305_01395
Unannotated protein; Belongs to the ABC transporter superfamily.
  
  
  0.408
Your Current Organism:
Marinilactibacillus piezotolerans
NCBI taxonomy Id: 258723
Other names: DSM 16108, JCM 12337, M. piezotolerans, Marinilactibacillus piezotolerans Toffin et al. 2005, strain LT20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.