STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112116636G protein-coupled receptor kinase 5-like. (597 aa)    
Predicted Functional Partners:
RCVRN
Recoverin.
   
 0.916
SMO
Smoothened, frizzled class receptor.
    
 0.853
LOC113407092
Blue-sensitive opsin.
   
 0.815
LOC112106118
Blue-sensitive opsin.
   
 0.815
RHO
Rhodopsin.
   
 0.815
GNB3
G protein subunit beta 3.
   
 0.779
GNB4
G protein subunit beta 4.
   
 0.779
GNB1
G protein subunit beta 1.
   
 0.779
GNA11
G protein subunit alpha 11.
    
 0.766
GNAQ
G protein subunit alpha q.
    
 0.766
Your Current Organism:
Terrapene carolina
NCBI taxonomy Id: 2587831
Other names: T. carolina triunguis, Terrapene carolina triunguis, Terrapene mexicana triunguis, Terrapene triunguis, Three-toed box turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.