STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1121073724-trimethylaminobutyraldehyde dehydrogenase. (514 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
 
 0.935
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
  0.930
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.907
ALDH6A1
Aldehyde dehydrogenase 6 family member A1.
  
0.906
ABAT
4-aminobutyrate aminotransferase.
  
 0.900
ACSS3
acyl-CoA synthetase short chain family member 3.
  
 0.882
ENSTMTP00000015955
annotation not available
  
 0.881
HADH
hydroxyacyl-CoA dehydrogenase.
 
 0.879
ALDH7A1
Aldehyde dehydrogenase 7 family member A1.
  
0.879
ENSTMTP00000021977
annotation not available
  
 0.878
Your Current Organism:
Terrapene carolina
NCBI taxonomy Id: 2587831
Other names: T. carolina triunguis, Terrapene carolina triunguis, Terrapene mexicana triunguis, Terrapene triunguis, Three-toed box turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.