STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA9Spermatogenesis associated 9. (226 aa)    
Predicted Functional Partners:
FLI1
Fli-1 proto-oncogene, ETS transcription factor.
      
 0.461
KIF24
Kinesin family member 24.
      
 0.448
CABYR
Calcium binding tyrosine phosphorylation regulated.
      
 0.442
RNF123
Ring finger protein 123.
      
 0.432
ASB6
Ankyrin repeat and SOCS box containing 6.
      
 0.422
LRRC6
Leucine rich repeat containing 6.
      
 0.404
ENSTMTP00000016955
annotation not available
      
 0.400
Your Current Organism:
Terrapene carolina
NCBI taxonomy Id: 2587831
Other names: T. carolina triunguis, Terrapene carolina triunguis, Terrapene mexicana triunguis, Terrapene triunguis, Three-toed box turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.