STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNIH3Cornichon family AMPA receptor auxiliary protein 3. (152 aa)    
Predicted Functional Partners:
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
   
 0.991
ENSTMTP00000032154
annotation not available
    
 0.976
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.976
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.954
ENSTMTP00000012594
annotation not available
    
 0.949
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.949
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 0.853
CACNG5
Calcium voltage-gated channel auxiliary subunit gamma 5.
    
 0.843
CACNG7
Calcium voltage-gated channel auxiliary subunit gamma 7.
    
 0.843
CACNG4
Calcium voltage-gated channel auxiliary subunit gamma 4.
   
 0.815
Your Current Organism:
Terrapene carolina
NCBI taxonomy Id: 2587831
Other names: T. carolina triunguis, Terrapene carolina triunguis, Terrapene mexicana triunguis, Terrapene triunguis, Three-toed box turtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.