STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSTMTP00000030811annotation not available (97 aa)    
Predicted Functional Partners:
TRAPPC5
Trafficking protein particle complex 5.
   
 0.988
TRAPPC4
Trafficking protein particle complex 4.
   
 0.986
TRAPPC1
Trafficking protein particle complex 1.
   
 0.985
TRAPPC8
Trafficking protein particle complex 8.
    
 0.984
TRAPPC9
Trafficking protein particle complex 9.
    
 0.976
TRAPPC11
Trafficking protein particle complex 11.
    
 0.971
TRAPPC6A
Trafficking protein particle complex 6A.
   
 0.968
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.968
LOC112119902
Trafficking protein particle complex subunit 10-like.
    
 0.967
LOC112117530
Trafficking protein particle complex subunit 2.
    
 0.967
Your Current Organism:
Terrapene carolina
NCBI taxonomy Id: 2587831
Other names: T. carolina triunguis, Terrapene carolina triunguis, Terrapene mexicana triunguis, Terrapene triunguis, Three-toed box turtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.