STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIE12Z_11706Integral membrane protein pth11. (356 aa)    
Predicted Functional Partners:
FIE12Z_5974
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.558
FIE12Z_9165
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.443
FIE12Z_6382
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.443
FIE12Z_3796
DNA-directed rna polymerase i, ii, and iii subunit rpabc1.
    
  0.443
FIE12Z_4176
DNA-directed rna polymerase ii subunit rpb3.
    
  0.422
FIE12Z_308
CFEM domain-containing protein.
    
  0.415
FIE12Z_3089
DNA-directed rna polymerase ii subunit rpb4.
    
  0.408
Your Current Organism:
Fusarium fasciculatum
NCBI taxonomy Id: 2594813
Other names: CBS 131382, CBS H-24057, F. fasciculatum, Fusarium fasciculatum J.W. Xia, L. Lombard, Sand.-Den., X.G. Zhang & Crous, 2019, Fusarium sp. FIESC_12, Fusarium sp. LL-2019k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.