STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIE12Z_3802Extracellular serine-rich protein. (209 aa)    
Predicted Functional Partners:
FIE12Z_12090
Uracil phosphoribosyltransferase.
    
 0.858
FIE12Z_5565
Uridine kinase.
    
 0.858
FIE12Z_2060
Uracil phosphoribosyltransferase.
    
 0.858
FIE12Z_3136
Uncharacterized protein.
    
 0.846
FIE12Z_6647
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.737
FIE12Z_205
Histone deacetylase 1/2.
   
 0.737
FIE12Z_8340
Bacterial low temperature requirement a protein.
    
 0.731
FIE12Z_5413
Uncharacterized protein.
    
 0.731
FIE12Z_5415
Uncharacterized protein.
    
 0.731
FIE12Z_8335
CDC73_C domain-containing protein.
    
  0.673
Your Current Organism:
Fusarium fasciculatum
NCBI taxonomy Id: 2594813
Other names: CBS 131382, CBS H-24057, F. fasciculatum, Fusarium fasciculatum J.W. Xia, L. Lombard, Sand.-Den., X.G. Zhang & Crous, 2019, Fusarium sp. FIESC_12, Fusarium sp. LL-2019k
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.