Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyc_0025 | Psyc_0120 | Psyc_0025 | Psyc_0120 | Conserved hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Conserved hypothetical protein; Possible protein disulfide-isomerase (PFAM dsbA, KEGG 5.3.4.1). RBS found. | 0.477 |
Psyc_0025 | dsbB | Psyc_0025 | Psyc_0034 | Conserved hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.515 |
Psyc_0033 | dsbB | Psyc_0033 | Psyc_0034 | Hypothetical protein. | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.448 |
Psyc_0120 | Psyc_0025 | Psyc_0120 | Psyc_0025 | Conserved hypothetical protein; Possible protein disulfide-isomerase (PFAM dsbA, KEGG 5.3.4.1). RBS found. | Conserved hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.477 |
Psyc_0120 | dsbB | Psyc_0120 | Psyc_0034 | Conserved hypothetical protein; Possible protein disulfide-isomerase (PFAM dsbA, KEGG 5.3.4.1). RBS found. | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.597 |
Psyc_0120 | dsbC | Psyc_0120 | Psyc_0254 | Conserved hypothetical protein; Possible protein disulfide-isomerase (PFAM dsbA, KEGG 5.3.4.1). RBS found. | Possible thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.675 |
Psyc_0159 | dsbB | Psyc_0159 | Psyc_0034 | Hypothetical protein. | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.429 |
dsbB | Psyc_0025 | Psyc_0034 | Psyc_0025 | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Conserved hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.515 |
dsbB | Psyc_0033 | Psyc_0034 | Psyc_0033 | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Hypothetical protein. | 0.448 |
dsbB | Psyc_0120 | Psyc_0034 | Psyc_0120 | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Conserved hypothetical protein; Possible protein disulfide-isomerase (PFAM dsbA, KEGG 5.3.4.1). RBS found. | 0.597 |
dsbB | Psyc_0159 | Psyc_0034 | Psyc_0159 | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Hypothetical protein. | 0.429 |
dsbB | dsbC | Psyc_0034 | Psyc_0254 | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Possible thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | 0.686 |
dsbB | gshA | Psyc_0034 | Psyc_0035 | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | 0.655 |
dsbC | Psyc_0120 | Psyc_0254 | Psyc_0120 | Possible thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Conserved hypothetical protein; Possible protein disulfide-isomerase (PFAM dsbA, KEGG 5.3.4.1). RBS found. | 0.675 |
dsbC | dsbB | Psyc_0254 | Psyc_0034 | Possible thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily. | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.686 |
gshA | dsbB | Psyc_0035 | Psyc_0034 | Glutamate-cysteine ligase; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. | Possible disulfide bond formation protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family. | 0.655 |