Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Psyc_0458 | Psyc_0459 | Conserved hypothetical protein; Part of a putative prophage. | Possible phage head-tail adaptor protein. | 0.794 |
Psyc_0458 | Psyc_0460 | Conserved hypothetical protein; Part of a putative prophage. | Hypothetical protein. | 0.799 |
Psyc_0458 | Psyc_0461 | Conserved hypothetical protein; Part of a putative prophage. | Possible major phage capsid subunit precursor. | 0.556 |
Psyc_0458 | Psyc_0462 | Conserved hypothetical protein; Part of a putative prophage. | Prohead peptidase, Unknown type peptidase, MEROPS family U35. | 0.429 |
Psyc_0458 | Psyc_0463 | Conserved hypothetical protein; Part of a putative prophage. | Probable phage portal protein. | 0.429 |
Psyc_0458 | Psyc_0464 | Conserved hypothetical protein; Part of a putative prophage. | Probable phage terminase, large subunit; Often located next to the small subunit. | 0.429 |
Psyc_0458 | Psyc_0465 | Conserved hypothetical protein; Part of a putative prophage. | Possible phage terminase, small subunit; Members tend to be adjacent to the phage terminase large subunit gene. | 0.429 |
Psyc_0459 | Psyc_0458 | Possible phage head-tail adaptor protein. | Conserved hypothetical protein; Part of a putative prophage. | 0.794 |
Psyc_0459 | Psyc_0460 | Possible phage head-tail adaptor protein. | Hypothetical protein. | 0.942 |
Psyc_0459 | Psyc_0461 | Possible phage head-tail adaptor protein. | Possible major phage capsid subunit precursor. | 0.808 |
Psyc_0459 | Psyc_0462 | Possible phage head-tail adaptor protein. | Prohead peptidase, Unknown type peptidase, MEROPS family U35. | 0.443 |
Psyc_0459 | Psyc_0463 | Possible phage head-tail adaptor protein. | Probable phage portal protein. | 0.684 |
Psyc_0459 | Psyc_0464 | Possible phage head-tail adaptor protein. | Probable phage terminase, large subunit; Often located next to the small subunit. | 0.429 |
Psyc_0459 | Psyc_0465 | Possible phage head-tail adaptor protein. | Possible phage terminase, small subunit; Members tend to be adjacent to the phage terminase large subunit gene. | 0.429 |
Psyc_0460 | Psyc_0458 | Hypothetical protein. | Conserved hypothetical protein; Part of a putative prophage. | 0.799 |
Psyc_0460 | Psyc_0459 | Hypothetical protein. | Possible phage head-tail adaptor protein. | 0.942 |
Psyc_0460 | Psyc_0461 | Hypothetical protein. | Possible major phage capsid subunit precursor. | 0.785 |
Psyc_0460 | Psyc_0462 | Hypothetical protein. | Prohead peptidase, Unknown type peptidase, MEROPS family U35. | 0.443 |
Psyc_0460 | Psyc_0463 | Hypothetical protein. | Probable phage portal protein. | 0.843 |
Psyc_0460 | Psyc_0464 | Hypothetical protein. | Probable phage terminase, large subunit; Often located next to the small subunit. | 0.429 |
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