STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyc_0468Hypothetical protein. (566 aa)    
Predicted Functional Partners:
Psyc_0469
Possible bacteriophage DNA primase; Within putative prophage.
     0.926
Psyc_1600
Possible outer membrane efflux protein, OMF family.
  
     0.694
Psyc_0450
Possible LambdaSo, minor tail protein M.
 
     0.659
Psyc_1194
Putative secreted protein, autotransporter domain protein.
  
     0.613
Psyc_0989
Merops peptidase family S24; LexA family, clan SF.
 
     0.584
Psyc_0119
Conserved hypothetical protein.
  
     0.557
Psyc_0341
Conserved hypothetical protein.
  
     0.516
Psyc_0445
Probable prophage LambdaSo, tail assembly protein K.
 
     0.464
Psyc_0470
Hypothetical protein.
       0.459
Psyc_1028
Hypothetical protein.
 
     0.449
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.