STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyc_0655Probable glycosyl transferase. (346 aa)    
Predicted Functional Partners:
Psyc_0654
Putative DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.859
capD
Polysaccharide biosynthesis protein CapD.
  
  
 0.806
neuA2
Putative Acylneuraminate cytidylyltransferase.
  
  
 0.801
Psyc_0649
Putative lipopolysaccharide biosynthesis tyrosine kinase.
 
  
 0.655
Psyc_0659
Probable methionyl-tRNA formyltransferase.
  
  
 0.654
Psyc_0660
N-acetylneuraminate synthase; Most likely carbohydrate biosynthesis.
  
  
 0.650
Psyc_0662
N-acetylneuraminate synthase.
  
  
 0.650
Psyc_0651
NAD-dependent epimerase.
 
 
 0.642
Psyc_0661
Putative LmbE-like protein.
     
 0.637
Psyc_0657
Probable polysaccharide biosynthesis protein.
  
    0.625
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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