STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyc_0807Transcriptional regulator, IclR family. (252 aa)    
Predicted Functional Partners:
Psyc_1174
Transcriptional regulator, IclR family; Nearly 60% ID to other putative transcriptional regulators in BLAST and the HTH motif hit is also strong InterPro:buthitstoIclRfamilyoftranscriptional regulators are weak.
  
     0.743
Psyc_0804
This family of bacterial transcriptional regulators includes the acetate operon repressor both of which are members of the iclR family [1, 2]. These proteins have a Helix-Turn-Helix motif at the N-terminus. The C-terminal region may bind to the regulatory.
  
     0.740
mdcY
Transcriptional regulator, GntR family.
  
  
 0.593
Psyc_1100
Possible allophanate hydrolase subunit 1.
  
    0.512
Psyc_1099
Possible allophanate hydrolase subunit 2; Related to Urea amidolyase.
  
    0.478
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.