STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psyc_0881Putative type I site specific deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1060 aa)    
Predicted Functional Partners:
hsdM-1
Putative type I restriction-modification system, M subunit.
 
 
 0.976
Psyc_0878
Probable type I restriction modification system methylase.
 
  
 0.936
Psyc_0321
Hypothetical protein.
  
 
 0.643
Psyc_0844
Conserved Hypothetical protein.
  
 
 0.643
Psyc_0879
Probable Death-on-curing family protein.
  
    0.636
Psyc_0880
Hypothetical protein; Signal predicted by SignalP 2.0 HMM (Signal peptide probabilty 1.000) with cleavage site probability 0.984 at residue 23.
       0.558
Psyc_0416
Probable type I restriction-modification system, subunit M (DNA methylase).
  
  
 0.535
Psyc_0565
Hypothetical protein.
  
    0.527
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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