Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyc_0014 | Psyc_0907 | Psyc_0014 | Psyc_0907 | Probable 2-nitropropane dioxygenase protein. | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | 0.423 |
Psyc_0014 | acpP | Psyc_0014 | Psyc_0522 | Probable 2-nitropropane dioxygenase protein. | Probable Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.695 |
Psyc_0014 | fabB | Psyc_0014 | Psyc_1899 | Probable 2-nitropropane dioxygenase protein. | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.498 |
Psyc_0014 | fabD | Psyc_0014 | Psyc_0520 | Probable 2-nitropropane dioxygenase protein. | [Acyl-carrier-protein] S-malonyltransferase. | 0.480 |
Psyc_0014 | fabF | Psyc_0014 | Psyc_1972 | Probable 2-nitropropane dioxygenase protein. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.557 |
Psyc_0014 | mdcG | Psyc_0014 | Psyc_1140 | Probable 2-nitropropane dioxygenase protein. | Probable malonyl-CoA ACP transacylase. | 0.455 |
Psyc_0907 | Psyc_0014 | Psyc_0907 | Psyc_0014 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | Probable 2-nitropropane dioxygenase protein. | 0.423 |
Psyc_0907 | Psyc_1830 | Psyc_0907 | Psyc_1830 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | Hypothetical protein. | 0.564 |
Psyc_0907 | acpP | Psyc_0907 | Psyc_0522 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | Probable Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.468 |
Psyc_0907 | coaE | Psyc_0907 | Psyc_0061 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.903 |
Psyc_0907 | fabB | Psyc_0907 | Psyc_1899 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | 3-oxoacyl-[acyl-carrier-protein] synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.642 |
Psyc_0907 | fabD | Psyc_0907 | Psyc_0520 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | [Acyl-carrier-protein] S-malonyltransferase. | 0.610 |
Psyc_0907 | fabF | Psyc_0907 | Psyc_1972 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | 3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.642 |
Psyc_0907 | fabI | Psyc_0907 | Psyc_1045 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | Enoyl-[acyl-carrier-protein] reductase (NADH); Glucose/ribitol dehydrogenase contains this domain for substrate. | 0.800 |
Psyc_0907 | mdcG | Psyc_0907 | Psyc_1140 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | Probable malonyl-CoA ACP transacylase. | 0.610 |
Psyc_0907 | pal | Psyc_0907 | Psyc_0908 | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | Outer membrane protein, OmpA/MotB family; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.420 |
Psyc_1830 | Psyc_0907 | Psyc_1830 | Psyc_0907 | Hypothetical protein. | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | 0.564 |
Psyc_1830 | acpP | Psyc_1830 | Psyc_0522 | Hypothetical protein. | Probable Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.962 |
acpP | Psyc_0014 | Psyc_0522 | Psyc_0014 | Probable Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Probable 2-nitropropane dioxygenase protein. | 0.695 |
acpP | Psyc_0907 | Psyc_0522 | Psyc_0907 | Probable Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Phosphopantetheine-protein transferase domain family protein; Belongs to the P-Pant transferase superfamily. | 0.468 |
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