node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Psyc_0917 | Psyc_0918 | Psyc_0917 | Psyc_0918 | Conserved hypothetical protein; Possible 6-pyruvoyl tetrahydropterin synthase. | Conserved hypothetical protein. | 0.777 |
Psyc_0917 | miaA | Psyc_0917 | Psyc_0920 | Conserved hypothetical protein; Possible 6-pyruvoyl tetrahydropterin synthase. | Probable tRNA delta(2)-isopentylpyrophosphate; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.512 |
Psyc_0917 | mutL | Psyc_0917 | Psyc_0919 | Conserved hypothetical protein; Possible 6-pyruvoyl tetrahydropterin synthase. | DNA mismatch repair protein MutL; The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like. | 0.628 |
Psyc_0918 | Psyc_0917 | Psyc_0918 | Psyc_0917 | Conserved hypothetical protein. | Conserved hypothetical protein; Possible 6-pyruvoyl tetrahydropterin synthase. | 0.777 |
Psyc_0918 | miaA | Psyc_0918 | Psyc_0920 | Conserved hypothetical protein. | Probable tRNA delta(2)-isopentylpyrophosphate; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.815 |
Psyc_0918 | mutL | Psyc_0918 | Psyc_0919 | Conserved hypothetical protein. | DNA mismatch repair protein MutL; The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like. | 0.728 |
Psyc_0918 | polA | Psyc_0918 | Psyc_0378 | Conserved hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.557 |
Psyc_1347 | dnaN | Psyc_1347 | Psyc_0002 | Probable rep helicase, single-stranded DNA-dependent ATPase protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.658 |
Psyc_1347 | mutL | Psyc_1347 | Psyc_0919 | Probable rep helicase, single-stranded DNA-dependent ATPase protein. | DNA mismatch repair protein MutL; The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like. | 0.612 |
Psyc_1347 | polA | Psyc_1347 | Psyc_0378 | Probable rep helicase, single-stranded DNA-dependent ATPase protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.602 |
Psyc_1347 | recA | Psyc_1347 | Psyc_1732 | Probable rep helicase, single-stranded DNA-dependent ATPase protein. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.704 |
dnaN | Psyc_1347 | Psyc_0002 | Psyc_1347 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Probable rep helicase, single-stranded DNA-dependent ATPase protein. | 0.658 |
dnaN | mutL | Psyc_0002 | Psyc_0919 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein MutL; The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like. | 0.936 |
dnaN | mutS | Psyc_0002 | Psyc_0247 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.990 |
dnaN | polA | Psyc_0002 | Psyc_0378 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
dnaN | recA | Psyc_0002 | Psyc_1732 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.791 |
dnaN | uvrD | Psyc_0002 | Psyc_0583 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction. | 0.685 |
ispA | mutL | Psyc_1935 | Psyc_0919 | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | DNA mismatch repair protein MutL; The mutL protein binds to mutS, which recognizes and binds to mismatches in DNA duplexes. The mutS-mutL-DNA complex stimulates mutH to cleave the unmethylated DNA strand at the GATC sequence; Contains following domains: DNA mismatch repair protein:ATP-binding region, ATPase-like. | 0.591 |
ispA | mutS | Psyc_1935 | Psyc_0247 | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.479 |
ispA | polA | Psyc_1935 | Psyc_0378 | Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.401 |