STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
exbBOuter membrane transport energization protein ExbB; TC 2.C.1.1.1. (193 aa)    
Predicted Functional Partners:
exbD
Outer membrane transport energization protein ExbD; TC 2.C.1.1.1.
 
 
 0.989
tolR
Cell division and transport-associated protein TolR; 4 bp overlap with a TolQ-like ORF; TC 2.C.1.2.1.
 
 
 0.950
tolB
Probable TolB periplasmic receptor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.867
Psyc_1317
Possible biopolymer transport protein ExbD/TolR.
 
 
 0.839
Psyc_0600
Hypothetical protein.
  
 
 0.824
tonB
Outer membrane transport energization protein TonB; TC 2.C.1.1.1.
  
 
 0.790
pal
Outer membrane protein, OmpA/MotB family; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
   
 0.724
bamA
Putative bacterial surface antigen (D15); Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.658
Psyc_0624
Outer membrane transport energization protein TonB; Probable Transposase, IS4.
  
 
 0.646
lolE
ABC lipoprotein exporter, inner membrane subunit, LolE.
 
   
 0.552
Your Current Organism:
Psychrobacter arcticus
NCBI taxonomy Id: 259536
Other names: P. arcticus 273-4, Psychrobacter arcticus 273-4, Psychrobacter arcticus str. 273-4, Psychrobacter arcticus strain 273-4, Psychrobacter sp. 273-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.